SwissParam

  • Medicinal chemistry
  • Proteins & Proteomes
  • Software tool
SwissParam is a fully automatic server that provides topology and parameters for small organic molecules, compatible with the CHARMM all atoms force field, for use with CHARMM and GROMACS.

You might also be interested in

      • Proteins & Proteomes
      • Structural Biology
      • , Medicinal chemistry
      • Software tool

    SwissDock

    Docking of small ligands into protein active sites
      • Proteins & Proteomes
      • Medicinal chemistry
      • , Structural analysis
      • Software tool

    SwissTargetPrediction

    Target prediction for bioactive small molecules
      • Proteins & Proteomes
      • Medicinal chemistry
      • , Structural analysis
      • Database

    SwissBioIsostere

    Database of molecular replacements for ligand design
      • Proteins & Proteomes
      • Medicinal chemistry
      • Software tool

    SwissADME

    Pharmacokinetics properties and druglikeness
      • Proteins & Proteomes
      • Database

    VenomZone

    Portal to venom protein UniProtKB entries
      • Proteins & Proteomes
      • Lipidomics
      • Database

    SwissLipids

    Knowledge resource for lipids
      • Proteins & Proteomes
      • Systems Biology
      • , Metabolomics
      • Database

    Rhea

    Expert-curated database of biochemical reactions
      • Proteins & Proteomes
      • Database

    ENZYME

    Enzyme nomenclature database
      • Proteins & Proteomes
      • Structural Biology
      • , Drug design
      • , Medicinal chemistry
      • , Structural analysis
      • Software tool

    Click2Drug

    Directory of computational drug design tools
      • Drug design
      • , Medicinal chemistry
      • Database
      • Software tool

    SwissDrugDesign

    Widening access to computer-aided drug design
      • Proteins & Proteomes
      • Systems Biology
      • , Metabolomics
      • Database

    Rhea SPARQL endpoint

    SPARQL access to the Rhea knowledgebase
      • Proteins & Proteomes
      • Glycomics
      • Software tool

    MzJava

    Open source Java class library to process MS fragmentation
      • Metabolomics
      • Software tool

    MSight

    Mass Spectrometry Imager
      • Medicinal chemistry
      • , Structural analysis
      • Database

    SwissSidechain

    Database of non-natural amino acid side chains
      • Proteins & Proteomes
      • Structural Biology
      • , Structural analysis
      • Software tool

    SWISS-MODEL Workspace

    Fully automated protein structure homology-modeling server
      • Proteins & Proteomes
      • Structural Biology
      • Database
      • Software tool

    SWISS-MODEL

    Protein structure homology-modelling
      • Proteins & Proteomes
      • Structural Biology
      • Database
      • Software tool

    CAMEO

    Weekly automated benchmarking of protein structure modelling
      • Structural Biology
      • Database

    ModelArchive

    Repository of predicted macromolecular structure models
      • Proteins & Proteomes
      • Structural analysis
      • Software tool

    QMEAN

    Protein model quality estimation